STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g1082Neuroguidin. (244 aa)    
Predicted Functional Partners:
AYI68_g8027
WD repeat-containing protein 43.
   
 0.996
AYI68_g4520
CBF domain-containing protein.
   
  0.996
AYI68_g2202
KRR1 small subunit processome component-like protein.
   
 0.996
AYI68_g436
Ribosome biogenesis protein enp2-like protein.
   
 
 0.996
AYI68_g5511
WD repeat-containing protein 46.
   
 0.995
AYI68_g5789
Protein BFR2.
   
 
 0.994
AYI68_g5067
Periodic tryptophan protein 2-like protein.
   
 
 0.994
AYI68_g2308
U3 small nucleolar RNA-associated protein 14.
   
 0.994
AYI68_g749
U3 small nucleolar RNA-associated protein 6.
   
 
 0.994
AYI68_g96
Putative U3 small nucleolar RNA-associated protein 11.
   
 0.994
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.