STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g1034Ubiquitin fusion degradation protein 1. (256 aa)    
Predicted Functional Partners:
AYI68_g142
Nuclear protein localization protein 4.
   
 0.999
AYI68_g3362
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.993
AYI68_g5064
UBX domain-containing protein 7.
    
 0.985
AYI68_g3507
N-acetyltransferase eso1.
     
 0.967
AYI68_g4197
Polyubiquitin.
   
 0.965
AYI68_g3994
Uncharacterized protein.
   
 
 0.964
AYI68_g7368
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.963
AYI68_g3234
E4 ubiquitin-protein ligase UFD2.
    
 
 0.963
AYI68_g1035
Ubiquitin-40S ribosomal protein S27a.
   
 0.946
AYI68_g6527
CUE domain-containing protein.
    
 
 0.944
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.