STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI68_g705WD repeat-containing protein 18. (524 aa)    
Predicted Functional Partners:
AYI68_g5205
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.985
AYI68_g820
Proliferation-associated protein 2G4.
  
 
 0.983
AYI68_g7057
Polynucleotide 5'-hydroxyl-kinase nol9.
   
 0.976
AYI68_g6591
Guanine nucleotide-binding protein-like 3-like protein.
   
 0.976
AYI68_g3508
Notchless protein-like protein.
  
 
 0.976
AYI68_g1628
Cell division control protein 18.
   
 0.970
AYI68_g451
CDT1_C domain-containing protein.
   
 0.968
AYI68_g1466
Ribosome biogenesis protein ERB1.
   
 0.962
AYI68_g2477
Ribosome biogenesis protein WDR12-like protein.
  
 
 0.959
AYI68_g1463
DNA helicase; Belongs to the MCM family.
   
 
 0.944
Your Current Organism:
Smittium mucronatum
NCBI taxonomy Id: 133383
Other names: S. mucronatum
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