STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN44131.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
SEN44164.1
Hypothetical protein.
       0.732
SEN44081.1
Hypothetical protein.
       0.631
SEN44098.1
Hypothetical protein.
       0.631
SEN44198.1
Hypothetical protein.
       0.627
SEN44220.1
Hypothetical protein.
       0.548
SEN44051.1
Hypothetical protein.
       0.544
SEN44029.1
Hypothetical protein.
       0.497
SEN44254.1
Hypothetical protein.
       0.439
Your Current Organism:
Paenibacillus sophorae
NCBI taxonomy Id: 1333845
Other names: CGMCC 1.10238, DSM 23020, P. sophorae, Paenibacillus sophorae Jin et al. 2011, strain S27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.