STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_006213Uncharacterized protein. (872 aa)    
Predicted Functional Partners:
BB561_002994
Ribosomal_L18_c domain-containing protein.
    
 
 0.941
BB561_001997
Brix domain-containing protein.
   
    0.898
BB561_006648
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.897
BB561_002681
WD_REPEATS_REGION domain-containing protein.
   
  
 0.867
BB561_002115
WD_REPEATS_REGION domain-containing protein.
   
    0.860
BB561_002715
Uncharacterized protein.
   
    0.840
BB561_000277
WD_REPEATS_REGION domain-containing protein.
   
    0.840
BB561_003858
NUC173 domain-containing protein.
   
    0.836
BB561_002491
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.831
BB561_005761
CPL domain-containing protein.
   
    0.830
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.