STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_005611Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1372 aa)    
Predicted Functional Partners:
BB561_003283
WD_REPEATS_REGION domain-containing protein.
    
 0.999
BB561_001415
BUB1 N-terminal domain-containing protein.
   
 0.999
BB561_002632
Uncharacterized protein.
    
 0.998
BB561_005850
Uncharacterized protein.
    
  0.997
BB561_002932
Uncharacterized protein.
    
  0.997
BB561_002633
SKIP_SNW domain-containing protein.
    
  0.997
BB561_001370
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.997
BB561_004779
Uncharacterized protein.
    
 0.996
BB561_002428
Uncharacterized protein.
   
 
 0.980
BB561_005407
WD_REPEATS_REGION domain-containing protein.
   
 
 0.972
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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