STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_005043Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (824 aa)    
Predicted Functional Partners:
BB561_000443
Uncharacterized protein.
    
 0.853
BB561_001472
V-SNARE coiled-coil homology domain-containing protein.
    
 0.841
BB561_005045
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.829
BB561_004821
t-SNARE coiled-coil homology domain-containing protein.
   
 0.829
BB561_006298
t-SNARE coiled-coil homology domain-containing protein.
   
 0.800
BB561_002615
Uncharacterized protein.
    
 0.658
BB561_004375
Uncharacterized protein.
    
 0.644
BB561_000111
Uncharacterized protein.
    
 0.633
BB561_002061
Sec8_exocyst domain-containing protein.
    
 0.599
BB561_005131
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
  0.589
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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