STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_004898GPI-anchored wall transfer protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor. (579 aa)    
Predicted Functional Partners:
BB561_006641
Uncharacterized protein.
     
 0.796
BB561_006234
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.551
BB561_000797
Uncharacterized protein.
     
 0.551
BB561_000794
Uncharacterized protein.
     
 0.551
BB561_000476
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.551
BB561_000130
Uncharacterized protein.
  
 
 0.446
BB561_006711
ADH_zinc_N domain-containing protein.
   
 
  0.416
BB561_006501
PKS_ER domain-containing protein.
   
 
  0.416
BB561_000504
ADH_zinc_N domain-containing protein.
   
 
  0.416
BB561_000342
PKS_ER domain-containing protein.
   
 
  0.416
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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