STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_004855Peptide hydrolase; Belongs to the peptidase M28 family. (533 aa)    
Predicted Functional Partners:
BB561_005638
AB hydrolase-1 domain-containing protein.
  
 0.653
BB561_002796
COesterase domain-containing protein.
  
 0.653
BB561_000202
Abhydrolase_3 domain-containing protein.
  
 0.653
BB561_003449
Uncharacterized protein.
  
 0.599
BB561_006540
Uncharacterized protein.
    
 0.569
BB561_003831
Uncharacterized protein.
    
 0.569
BB561_000644
CYTOSOL_AP domain-containing protein.
     
 0.556
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.549
BB561_005854
Uncharacterized protein.
    
 0.547
BB561_000870
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
  0.543
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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