STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_004092Peptidase S1 domain-containing protein. (262 aa)    
Predicted Functional Partners:
BB561_001588
Uncharacterized protein.
    
 0.579
BB561_001919
Uncharacterized protein.
    
 0.486
BB561_000052
Uncharacterized protein.
    
 0.486
BB561_001856
Uncharacterized protein.
   
  0.470
BB561_001502
Uncharacterized protein.
   
  0.470
BB561_001506
Uncharacterized protein.
   
  0.470
BB561_004065
Uncharacterized protein.
    
  0.457
BB561_000106
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
    
  0.457
BB561_004540
Uncharacterized protein.
   
  0.426
BB561_001880
Uncharacterized protein.
   
  0.426
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.