STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_004083UDENN domain-containing protein. (630 aa)    
Predicted Functional Partners:
BB561_002777
AB hydrolase-1 domain-containing protein.
   
 0.707
BB561_003845
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.635
BB561_001790
SE domain-containing protein.
   
 0.632
BB561_002291
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.620
BB561_002606
Uncharacterized protein.
  
 0.598
BB561_004937
Carrier domain-containing protein.
   
 0.597
BB561_003940
Uncharacterized protein.
   
 0.597
BB561_002675
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.591
BB561_003604
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.586
BB561_002997
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.586
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.