STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_002498Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
BB561_001409
Uncharacterized protein.
   
 0.971
BB561_001355
Uncharacterized protein.
    
 0.773
BB561_006956
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.730
BB561_002306
Uncharacterized protein.
     
 0.681
BB561_003664
Uncharacterized protein.
    
 0.640
BB561_001607
ANK_REP_REGION domain-containing protein.
   
 0.636
BB561_000130
Uncharacterized protein.
   
  0.604
BB561_000269
Uncharacterized protein.
   
   0.600
BB561_004033
Uncharacterized protein.
   
 
 0.594
BB561_001778
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
   0.579
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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