STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB561_000929Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
BB561_005646
Uncharacterized protein.
    
 0.998
BB561_002029
Nuclear pore protein.
   
 0.990
BB561_004724
Uncharacterized protein.
   
 0.981
BB561_003594
Uncharacterized protein.
   
 0.979
BB561_004255
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.961
BB561_002301
Uncharacterized protein.
   
 0.956
BB561_002152
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.916
BB561_002258
Uncharacterized protein.
   
 0.888
BB561_001038
Uncharacterized protein.
   
 0.866
BB561_002698
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.858
Your Current Organism:
Smittium simulii
NCBI taxonomy Id: 133385
Other names: S. simulii, Smittium simuli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.