STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_0172Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (242 aa)    
Predicted Functional Partners:
M2A_2813
Double-strand break repair protein AddB.
 
     0.786
M2A_0606
SmpA/OmlA domain-containing protein.
  
 
 
 0.774
M2A_2814
Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.
 
     0.742
M2A_1127
N-acetylmuramoyl-L-alanine amidase.
    
   0.728
M2A_1166
DNA polymerase III chi subunit HolC.
  
     0.720
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.701
M2A_0171
Cell divisionFtsK/SpoIIIE.
  
  
 0.676
M2A_1352
Conserved protein.
  
     0.671
M2A_1919
DnaJ family molecular chaperone.
  
   
 0.671
M2A_1045
LolC/E family lipoprotein releasing system, transmembrane protein.
 
 
 
 0.669
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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