STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_0435Extracellular solute-binding protein. (584 aa)    
Predicted Functional Partners:
M2A_1821
Binding-protein-dependent transport systems inner membrane component.
 
 0.884
M2A_1822
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 0.877
M2A_1820
Oligopeptide ABC transporter membrane protein.
  
 0.858
M2A_0436
2-nitropropane dioxygenase NPD.
       0.773
M2A_0437
AMP-dependent synthetase and ligase.
  
    0.637
M2A_0434
Invasion associated locus B family protein.
 
     0.592
M2A_1926
ABC-2:ABC transporter related.
     
 0.545
M2A_1819
Extracellular solute-binding protein.
  
  
 
0.409
M2A_1818
Extracellular solute-binding protein.
  
  
 
0.403
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
 
 0.401
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.