STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_0736Twin-arginine translocation pathway signal. (389 aa)    
Predicted Functional Partners:
M2A_0737
Transcriptional regulator, MarR family.
 
 
  0.947
M2A_1926
ABC-2:ABC transporter related.
  
  
 0.819
M2A_1925
ABC transporter, permease.
  
  
 0.692
M2A_2043
ABC-2 type transporter.
  
  
 0.692
M2A_0438
Glyoxalase family protein.
  
    0.615
M2A_1442
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.600
M2A_2177
Abortive infection protein.
  
  
 0.576
tadA
Zinc-binding CMP/dCMP deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.543
M2A_1703
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.
 
 
 0.541
M2A_2543
Transcriptional regulator, MarR family protein.
  
 
  0.536
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.