STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_0779Dehydratase. (348 aa)    
Predicted Functional Partners:
M2A_0427
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.955
M2A_0967
acyl-CoA dehydrogenase domain-containing protein.
  
  0.954
M2A_0777
citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.863
M2A_0368
Catalase; Belongs to the catalase family.
   
 0.846
M2A_0970
methylmalonyl-CoA mutase large subunit.
 
  
 0.782
M2A_0780
Aldehyde ferredoxin oxidoreductase.
       0.773
M2A_1151
Carbamoyl-phosphate synthase L chain ATP-binding.
  
 
 0.742
M2A_2095
NAD-binding 3-hydroxyacyl-CoA dehydrogenase.
  
 0.689
M2A_2234
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.689
M2A_1212
Isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  0.637
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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