STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1104Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (124 aa)    
Predicted Functional Partners:
M2A_1109
FeS assembly protein SufB.
  
 
 0.974
M2A_1110
Class V aminotransferase.
 
  
 0.961
M2A_1108
FeS assembly ATPase SufC.
  
 
 0.943
M2A_1107
FeS assembly protein SufD.
  
 
 0.928
M2A_3173
Heat shock protein DnaJ domain-containing protein.
  
 
 0.912
M2A_2524
NifU-like N terminal domain, putative.
  
  
 0.910
M2A_1111
BadM/Rrf2 family transcriptional regulator.
 
  
 0.900
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.881
M2A_1278
Ferredoxin.
 
 
 0.871
M2A_3324
Ferredoxin, 2Fe-2S.
 
 
 0.865
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.