STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1131Peptidase M48 Ste24p. (439 aa)    
Predicted Functional Partners:
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
  0.909
M2A_0817
Peptidase M23B.
   
 
 0.892
M2A_1132
Putative outer membrane protein.
 
    0.830
M2A_1951
Chemotaxis sensory transducer.
    
 0.797
M2A_2245
Methyl-accepting chemotaxis protein.
    
 0.777
M2A_1523
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase.
    
 0.648
M2A_0385
Sensor protein.
  
 
 0.586
M2A_1397
Histidine kinase.
    
 0.585
M2A_3231
Methyl-accepting chemotaxis receptor/sensory transducer.
    
 0.525
M2A_1203
HpcH/HpaI aldolase.
  
     0.494
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.