STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1354Arylsulfate sulfotransferase-like protein. (87 aa)    
Predicted Functional Partners:
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.688
M2A_1352
Conserved protein.
 
    0.664
M2A_2456
Conserved protein.
  
     0.562
M2A_0234
Conserved protein.
  
     0.559
M2A_2199
N-formylglutamate amidohydrolase.
  
     0.528
M2A_1921
Cobalt chelatase, pCobT subunit.
 
     0.514
M2A_0329
Conserved protein.
  
     0.479
M2A_2165
N-formylglutamate amidohydrolase.
  
     0.474
M2A_1994
Disulfide bond formation protein DsbB.
  
     0.446
M2A_0260
Extracellular ligand-binding receptor.
  
     0.440
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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