STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1440MarR family transcriptional regulator. (149 aa)    
Predicted Functional Partners:
M2A_1438
Thioesterase superfamily protein.
 
     0.879
M2A_1439
Putative methylisocitrate lyase.
       0.773
M2A_2790
Regulatory protein IclR.
  
 
 0.761
M2A_2605
MarR family transcriptional regulator.
  
     0.750
M2A_1442
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
  0.740
M2A_2323
Conserved protein.
  
   
 0.726
M2A_1441
Carboxymuconolactone decarboxylase.
 
     0.633
M2A_2787
Amidohydrolase 2.
  
     0.599
M2A_1285
Conserved protein.
  
     0.587
M2A_1437
Protein of unknown function DUF306, Meta and HslJ.
       0.556
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.