STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1543Conserved protein. (176 aa)    
Predicted Functional Partners:
M2A_1542
DSBA oxidoreductase.
 
     0.682
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.678
M2A_2814
Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.
  
     0.676
M2A_2813
Double-strand break repair protein AddB.
  
     0.597
M2A_1544
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.568
M2A_1352
Conserved protein.
  
     0.552
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.494
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
     0.462
M2A_2265
Conserved protein.
  
     0.448
M2A_1540
Conserved protein.
 
     0.447
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.