STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1684Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family. (284 aa)    
Predicted Functional Partners:
M2A_1704
DNA-binding transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
  
     0.702
M2A_2420
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.630
M2A_1685
Phenylacetate degradation protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.515
M2A_2489
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.511
M2A_2223
Glutamate synthase.
     
 0.479
M2A_2015
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.406
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.