STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1688Aminopeptidase N. (882 aa)    
Predicted Functional Partners:
M2A_1825
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
 0.865
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 0.839
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.815
M2A_0922
Gamma-glutamyltransferase.
     
 0.791
M2A_1130
Gamma-glutamyltranspeptidase.
     
 0.791
M2A_2791
NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.791
M2A_0327
Conserved protein.
   
 
 0.742
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 
 0.742
M2A_1212
Isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.673
M2A_0816
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
    
 0.669
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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