STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1703Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase. (338 aa)    
Predicted Functional Partners:
M2A_2131
Putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
 
 
 0.821
M2A_1702
Putative Cobalamin (5'-phosphate) synthase.
  
  
 0.806
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.793
M2A_1700
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.705
M2A_2389
uroporphyrin-III methylase, involved in siroheme cofactor synthesis for assimilatory nitrite reductase; Belongs to the precorrin methyltransferase family.
 
  
 0.681
M2A_1198
Phosphoglycerate mutase.
 
 
 0.679
M2A_0439
Phosphoglycerate mutase.
 
 
 0.662
M2A_1704
DNA-binding transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
       0.651
M2A_1701
Conserved protein.
       0.585
M2A_1085
Phosphoglycerate mutase.
  
 
 0.569
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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