STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1736Zn-dependent hydrolase. (336 aa)    
Predicted Functional Partners:
M2A_0925
Conserved protein.
  
    0.695
M2A_3372
Conserved protein.
  
    0.695
M2A_2162
Alpha/beta hydrolase fold protein.
    
 
 0.553
M2A_2545
Choline dehydrogenase.
     
 0.549
M2A_1146
Rhodanese domain-containing protein.
  
 0.541
M2A_1735
Monooxygenase FAD-binding.
  
  
 0.510
M2A_1737
Gamma-butyrolactone autoregulator receptor.
       0.481
M2A_0574
Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.469
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.452
M2A_0265
Conserved protein.
  
 
  0.438
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.