STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1829Type II secretion system protein. (320 aa)    
Predicted Functional Partners:
M2A_1830
Type II secretion system protein.
 
  
 0.995
M2A_1832
Response regulator receiver protein.
 
  
 0.993
M2A_1835
SAF domain-containing protein.
 
  
 0.993
M2A_1831
Type II secretion system protein E.
 
  
 0.987
M2A_1834
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.983
M2A_3202
Type II/IV secretion system protein.
 
  
 0.936
M2A_0022
Type II/IV secretion system protein.
 
  
 0.933
M2A_1833
Pilus biogenesis lipoprotein CpaD.
 
     0.931
M2A_1839
Flp pilus assembly protein TadG.
 
    0.924
M2A_1840
TadE family protein.
 
    0.923
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.