STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1920Cobalt chelatase, pCobS small subunit. (333 aa)    
Predicted Functional Partners:
M2A_1921
Cobalt chelatase, pCobT subunit.
 
 
 0.987
M2A_0268
Putative nitric-oxide reductase.
  
  
 0.850
M2A_2680
haemagluttinin:Filamentous haemagglutinin-like.
   
    0.765
M2A_1919
DnaJ family molecular chaperone.
 
     0.747
M2A_0287
Malic enzyme.
  
    0.520
M2A_3092
Conserved protein.
  
     0.471
M2A_1023
LexA repressor.
  
    0.470
M2A_1517
Cytochrome c oxidase subunit III.
  
  
 0.449
M2A_1940
Helicase domain-containing protein.
  
     0.443
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.432
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.