STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_1928Carbamate kinase; Belongs to the carbamate kinase family. (296 aa)    
Predicted Functional Partners:
M2A_1931
Putrescine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.991
M2A_2045
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.986
aguA
Agmatine deiminase.
  
  
 0.835
M2A_0174
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
     
 0.797
M2A_1092
Glutamine synthetase.
     
 0.797
M2A_2874
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
     
 0.797
M2A_1927
Secretion protein.
       0.720
M2A_1925
ABC transporter, permease.
  
    0.710
M2A_1930
Amino acid permease-associated protein.
 
  
 0.706
M2A_1926
ABC-2:ABC transporter related.
       0.687
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.