STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2012Putative transporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (477 aa)    
Predicted Functional Partners:
M2A_0385
Sensor protein.
  
 
 0.930
M2A_2379
Conserved protein.
  
 0.914
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.840
M2A_0282
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.826
M2A_1217
Multi-sensor hybrid histidine kinase.
   
 
 0.826
M2A_2219
Multi-sensor hybrid histidine kinase.
   
 
 0.826
M2A_0532
Amino acid ABC transporter ATP-binding protein.
  
  
 0.820
M2A_0139
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase.
  
 
 0.797
M2A_0792
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.761
M2A_1098
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.761
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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