M2A_2040 protein (Tepidicaulis marinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2A_2040

Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake. (243 aa)

Predicted Functional Partners:

pstB

0.994

M2A_2038

0.980

M2A_3223

0.979

M2A_3224

0.976

M2A_3226

0.945

M2A_2036

0.897

M2A_2037

0.881

M2A_3225

0.839

M2A_2041

0.817

M2A_0649

0.697

Your Current Organism:

Tepidicaulis marinus

NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2A_0649	M2A_2040	M2A_0649	M2A_2040	Signal peptidase I; Belongs to the peptidase S26 family.	Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.	0.697
M2A_2036	M2A_2037	M2A_2036	M2A_2037	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.999
M2A_2036	M2A_2038	M2A_2036	M2A_2038	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter permease PstA.	0.999
M2A_2036	M2A_2040	M2A_2036	M2A_2040	Phosphate ABC transporter periplasmic-binding protein.	Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.	0.897
M2A_2036	M2A_2041	M2A_2036	M2A_2041	Phosphate ABC transporter periplasmic-binding protein.	Two component transcriptional regulator.	0.452
M2A_2036	M2A_3223	M2A_2036	M2A_3223	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.	0.933
M2A_2036	M2A_3224	M2A_2036	M2A_3224	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter inner membrane subunit PstA.	0.935
M2A_2036	M2A_3225	M2A_2036	M2A_3225	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter, PhoT family TC 3.A.1.7.1, membrane protein 1; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.931
M2A_2036	pstB	M2A_2036	M2A_2039	Phosphate ABC transporter periplasmic-binding protein.	Phosphate ABC transporter ATPase; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.997
M2A_2037	M2A_2036	M2A_2037	M2A_2036	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter periplasmic-binding protein.	0.999
M2A_2037	M2A_2038	M2A_2037	M2A_2038	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter permease PstA.	0.999
M2A_2037	M2A_2040	M2A_2037	M2A_2040	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.	0.881
M2A_2037	M2A_2041	M2A_2037	M2A_2041	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Two component transcriptional regulator.	0.615
M2A_2037	M2A_3223	M2A_2037	M2A_3223	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.	0.973
M2A_2037	M2A_3224	M2A_2037	M2A_3224	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter inner membrane subunit PstA.	0.934
M2A_2037	M2A_3226	M2A_2037	M2A_3226	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter phosphate-binding protein.	0.941
M2A_2037	pstB	M2A_2037	M2A_2039	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	Phosphate ABC transporter ATPase; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.999
M2A_2038	M2A_2036	M2A_2038	M2A_2036	Phosphate ABC transporter permease PstA.	Phosphate ABC transporter periplasmic-binding protein.	0.999
M2A_2038	M2A_2037	M2A_2038	M2A_2037	Phosphate ABC transporter permease PstA.	Phosphate ABC transporter inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.	0.999
M2A_2038	M2A_2040	M2A_2038	M2A_2040	Phosphate ABC transporter permease PstA.	Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.	0.980