STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2107Hypothetical protein. (81 aa)    
Predicted Functional Partners:
M2A_1589
Conserved protein.
   
 0.941
M2A_0519
Non-specific protein-tyrosine kinase.
    
 0.860
M2A_0516
Sugar transferase.
    
  0.831
M2A_0023
Secreted protein.
    
 
 0.794
M2A_1407
Conserved protein.
    
 
 0.794
M2A_1876
Dynein heavy chain.
    
 
 0.794
M2A_3156
Secreted protein.
    
 
 0.794
M2A_3201
Secreted protein.
    
 
 0.794
M2A_1445
Conserved protein.
    
   0.750
M2A_2106
Conserved protein.
       0.746
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.