STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2188Conserved protein. (286 aa)    
Predicted Functional Partners:
M2A_2187
Exporter of the RND superfamily.
   
 0.944
M2A_2189
Conserved protein.
 
     0.898
M2A_2324
Conserved protein.
   
 0.858
M2A_1127
N-acetylmuramoyl-L-alanine amidase.
    
   0.728
M2A_1255
ABC transporter-like protein.
   
 
 0.684
M2A_1045
LolC/E family lipoprotein releasing system, transmembrane protein.
   
 
 0.655
M2A_1256
Conserved protein.
   
 
 0.655
lolD
ABC transporter-like protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
 0.638
M2A_2001
ABC transporter-like protein.
   
 
 0.638
M2A_2002
Conserved protein.
   
 
 0.618
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.