STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2215Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
M2A_2213
ABC transporter-like protein.
 
 0.999
M2A_2214
ABC transporter-like protein.
 
 0.999
M2A_2216
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
M2A_2217
Extracellular ligand-binding receptor.
 
 
 0.998
M2A_0260
Extracellular ligand-binding receptor.
  
 
 0.936
M2A_2090
SCP-like extracellular.
   
   0.909
M2A_1869
ABC transporter-like protein.
 
      0.637
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
   
    0.580
M2A_1397
Histidine kinase.
    
  0.522
M2A_0385
Sensor protein.
    
 0.518
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.