STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2224Glutamate synthase subunit beta. (472 aa)    
Predicted Functional Partners:
M2A_2223
Glutamate synthase.
 0.999
M2A_2201
Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
 0.998
M2A_3248
Zinc finger CDGSH-type domain protein.
  
 0.993
M2A_1063
NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.952
M2A_2388
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.942
M2A_0956
Electron transfer flavoprotein alpha/beta-subunit.
   
 
 0.909
M2A_0174
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
  
 
 0.904
M2A_1092
Glutamine synthetase.
  
 
 0.904
M2A_2874
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
  
 
 0.904
M2A_1265
Ferredoxin.
    
 0.899
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.