STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2259UDP-glucose 6-dehydrogenase. (436 aa)    
Predicted Functional Partners:
M2A_2258
UTP-glucose-1-phosphate uridylyltransferase.
 
 0.987
M2A_2686
NAD-dependent epimerase/dehydratase.
 0.975
M2A_2256
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.954
M2A_0516
Sugar transferase.
    
 0.908
M2A_0520
Polysaccharide biosynthesis protein.
  
  
 0.897
M2A_2669
Polysaccharide biosynthesis protein.
  
  
 0.897
M2A_2660
VI polysaccharide biosynthesis protein VipB/tviC.
 
 0.874
M2A_2674
Alcohol dehydrogenase zinc-binding domain-containing protein.
  
 
 0.874
M2A_0462
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.858
M2A_2205
Group 1 glycosyl transferase.
 
  
 0.851
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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