STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2419Flavoprotein wrbA. (198 aa)    
Predicted Functional Partners:
M2A_2861
Endoribonuclease L-PSP.
 
      0.880
M2A_2473
Lipoprotein-like protein.
   
  
 0.845
M2A_2334
Peptidoglycan-binding LysM.
   
  
 0.788
M2A_0150
Ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.787
M2A_2358
Dps family ferritin; Belongs to the Dps family.
  
  
 0.787
M2A_2418
Glutathione S-transferase protein.
  
  
 0.775
M2A_0368
Catalase; Belongs to the catalase family.
  
  
 0.739
M2A_2139
Flavodoxin-like fold protein.
    
 0.657
M2A_2629
Putative DnaJ/CbpA-type protein.
   
  
 0.645
M2A_3072
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.634
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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