STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2435Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (447 aa)    
Predicted Functional Partners:
M2A_2959
Cytochrome c oxidase, cbb3-type subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.945
M2A_1610
OmpW family protein.
 
  
 0.924
M2A_2958
Cytochrome c oxidase, cbb3-type subunit II.
 
  
 0.920
M2A_2955
Cytochrome c oxidase cbb3 type accessory protein FixG.
 
  
 0.913
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
    
 0.837
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.798
M2A_2956
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.788
M2A_1297
Conserved protein.
  
    0.785
M2A_1865
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9.
  
  
 0.668
M2A_0205
Conserved protein.
    
 0.659
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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