STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2463MarR family transcriptional regulator. (198 aa)    
Predicted Functional Partners:
M2A_2462
Two component transcriptional regulator.
     
 0.809
M2A_2461
Integral membrane sensor signal transduction histidine kinase.
       0.696
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
     0.639
M2A_2466
Molybdopterin converting factor, subunit 1.
  
     0.502
M2A_2460
Conserved protein.
       0.488
M2A_0385
Sensor protein.
  
  
 0.440
M2A_1397
Histidine kinase.
 
 
 
 0.435
M2A_2609
Ferric uptake regulator family protein; Belongs to the Fur family.
   
  
 0.424
M2A_1940
Helicase domain-containing protein.
  
     0.408
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.