STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2534Conserved protein. (111 aa)    
Predicted Functional Partners:
M2A_1664
Peptidoglycan-binding domain-containing protein.
  
     0.564
M2A_1407
Conserved protein.
  
     0.536
M2A_2535
Rhomboid family protein.
       0.517
M2A_2536
DSBA oxidoreductase.
       0.517
M2A_1047
Conserved protein.
  
     0.478
M2A_2475
Short chain dehydrogenase.
  
     0.455
M2A_2605
MarR family transcriptional regulator.
  
     0.449
M2A_1607
XRE family transcriptional regulator.
  
     0.446
M2A_0745
Conserved protein.
  
     0.430
M2A_1285
Conserved protein.
  
     0.422
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.