STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2605MarR family transcriptional regulator. (156 aa)    
Predicted Functional Partners:
M2A_1440
MarR family transcriptional regulator.
  
     0.750
M2A_2790
Regulatory protein IclR.
  
 
 0.730
M2A_2323
Conserved protein.
  
   
 0.672
M2A_2606
Short-chain dehydrogenase/reductase SDR.
    
  0.632
M2A_2779
Uncharacterized protein, possibly involved in aromatic compounds catabolism.
  
     0.535
M2A_2787
Amidohydrolase 2.
  
     0.531
M2A_2794
Carboxymuconolactone decarboxylase.
  
     0.528
M2A_2604
Conserved protein.
       0.526
M2A_2777
Transcriptional regulators.
  
    0.525
M2A_2162
Alpha/beta hydrolase fold protein.
  
   
 0.523
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.