STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2713Conserved protein. (270 aa)    
Predicted Functional Partners:
M2A_2714
Amine oxidase.
  
 0.996
M2A_0527
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.981
M2A_2267
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.960
M2A_2716
anti-ECFsigma factor, ChrR.
 
  
 0.870
M2A_0621
Conserved protein.
     0.853
M2A_2715
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.685
M2A_3009
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.683
M2A_2581
Major facilitator transporter.
 
  
 0.669
M2A_2580
Sodium:galactoside symporter family protein.
 
  
 0.666
M2A_1716
Major facilitator transporter.
 
  
 0.654
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.