STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_3104TetR family transcriptional regulator. (205 aa)    
Predicted Functional Partners:
M2A_3103
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.597
M2A_2243
TetR family transcriptional regulator.
  
     0.568
M2A_1358
TetR family transcriptional regulator.
  
     0.554
M2A_3105
Conserved protein.
       0.545
M2A_0833
TetR family transcriptional regulator.
  
     0.537
M2A_3102
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
       0.510
M2A_3106
Signal transduction histidine kinase.
   
   0.444
M2A_2076
TetR family transcriptional regulator.
  
     0.439
M2A_2368
TetR family transcriptional regulator.
  
     0.404
M2A_1987
TetR family transcriptional regulator.
  
     0.401
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.