STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_3118Transcriptional regulator, BadM/Rrf2 family. (146 aa)    
Predicted Functional Partners:
M2A_1110
Class V aminotransferase.
  
 
 0.899
M2A_2524
NifU-like N terminal domain, putative.
  
  
 0.710
M2A_2959
Cytochrome c oxidase, cbb3-type subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.676
M2A_0336
BadM/Rrf2 family transcriptional regulator.
  
   
 0.580
M2A_1111
BadM/Rrf2 family transcriptional regulator.
  
   
 0.575
M2A_3119
Conserved protein.
       0.506
M2A_2958
Cytochrome c oxidase, cbb3-type subunit II.
  
    0.493
M2A_2955
Cytochrome c oxidase cbb3 type accessory protein FixG.
  
  
 0.486
M2A_3173
Heat shock protein DnaJ domain-containing protein.
  
  
 0.484
M2A_2957
Cbb3-type cytochrome c oxidase subunit CcoQ.
   
    0.463
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.