STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_3307Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)    
Predicted Functional Partners:
M2A_0287
Malic enzyme.
  
 
 0.915
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
 0.915
M2A_2223
Glutamate synthase.
  
 
 0.910
M2A_2674
Alcohol dehydrogenase zinc-binding domain-containing protein.
  
 0.864
M2A_0993
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.845
M2A_3174
5-oxoprolinase.
  
 
  0.804
M2A_3358
Amine oxidase, flavin-containing.
     
 0.786
M2A_2791
NADH:flavin oxidoreductase/NADH oxidase.
  
 0.784
M2A_0477
Amidase; Belongs to the amidase family.
     
 0.782
M2A_0478
Amidase.
     
 0.782
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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