STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC68305.1TonB-linked outer membrane protein, SusC/RagA family. (1001 aa)    
Predicted Functional Partners:
SFC68330.1
Starch-binding associating with outer membrane.
 
     0.941
SFC92058.1
Starch-binding associating with outer membrane.
  
     0.774
SFC69631.1
Starch-binding associating with outer membrane.
  
     0.718
SFC21910.1
Starch-binding associating with outer membrane.
  
     0.711
SFC45289.1
Starch-binding associating with outer membrane.
  
     0.692
SFC73331.1
Starch-binding associating with outer membrane.
  
     0.671
SFC66854.1
Starch-binding associating with outer membrane.
  
     0.637
SFB84293.1
Starch-binding associating with outer membrane.
  
     0.618
SFC72864.1
Starch-binding associating with outer membrane.
  
     0.599
SFC69579.1
Signal transduction histidine kinase.
  
     0.573
Your Current Organism:
Zunongwangia mangrovi
NCBI taxonomy Id: 1334022
Other names: DSM 24499, KCTC 23496, LMG 26237, LMG:26237, Z. mangrovi, Zunongwangia mangrovi Rameshkumar et al. 2014, Zunongwangia sp. P2E16, strain P2E16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.