STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g12066Sas10 domain-containing protein. (665 aa)    
Predicted Functional Partners:
AYI70_g12038
U3 small nucleolar ribonucleoprotein IMP3.
   
  0.999
AYI69_g4584
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.999
AYI70_g4812
ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family.
   
 0.999
AYI70_g7099
40S ribosomal protein S9-A; Belongs to the universal ribosomal protein uS4 family.
   
  0.999
AYI70_g7072
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
AYI70_g5463
U3 small nucleolar RNA-associated protein 5.
   
 0.999
AYI70_g5382
rRNA-processing protein FCF1-like protein.
   
 0.999
AYI70_g4772
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.999
AYI70_g3602
WD repeat-containing protein 75.
   
 0.999
AYI70_g3502
ATP-dependent RNA helicase ROK1; Belongs to the DEAD box helicase family.
   
 0.999
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.