STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g11986DNA mismatch repair protein PMS1. (565 aa)    
Predicted Functional Partners:
AYI70_g3005
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.981
AYI70_g9336
DNA mismatch repair protein msh-2.
  
 0.977
AYI70_g1663
DNA mismatch repair protein Mlh1.
  
 
0.962
AYI70_g7175
DNA mismatch repair protein Mlh1.
    
 0.955
AYI70_g2913
DNA mismatch repair protein MutS.
 
 0.941
AYI70_g2871
DNA mismatch repair protein MutS.
 
 0.941
AYI70_g8135
DNA mismatch repair protein msh-3.
 
 0.888
AYI70_g6241
DNA mismatch repair protein msh-3.
 
 0.888
AYI70_g10345
DNA mismatch repair protein msh3.
 
 0.887
AYI70_g7891
DNA mismatch repair protein msh3.
 
 0.876
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.