AYI70_g11696 protein (Smittium culicis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AYI70_g11696

60 kDa lysophospholipase. (747 aa)

Predicted Functional Partners:

AYI70_g1331

0.878

AYI70_g530

0.861

AYI70_g7758

0.849

AYI70_g11565

0.838

AYI70_g5408

0.838

AYI70_g625

0.836

AYI70_g5143

0.822

AYI70_g8663

0.813

AYI70_g4611

0.813

AYI70_g3941

0.802

Your Current Organism:

Smittium culicis

NCBI taxonomy Id: 133412
Other names: S. culicis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYI70_g11565	AYI70_g11696	A0A1R1X1C5	A0A1R1X0P3	Asparagine synthetase domain-containing protein 1.	60 kDa lysophospholipase.	0.838
AYI70_g11565	AYI70_g1331	A0A1R1X1C5	A0A1R1YCZ9	Asparagine synthetase domain-containing protein 1.	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.	0.856
AYI70_g11565	AYI70_g3941	A0A1R1X1C5	A0A1R1XTT2	Asparagine synthetase domain-containing protein 1.	Amidophosphoribosyltransferase.	0.831
AYI70_g11565	AYI70_g4611	A0A1R1X1C5	A0A1R1XYD8	Asparagine synthetase domain-containing protein 1.	Glutamine-fructose-6-phosphate aminotransferase [isomerizing].	0.756
AYI70_g11565	AYI70_g5143	A0A1R1X1C5	A0A1R1XW73	Asparagine synthetase domain-containing protein 1.	Argininosuccinate synthase.	0.827
AYI70_g11565	AYI70_g530	A0A1R1X1C5	A0A1R1YGD6	Asparagine synthetase domain-containing protein 1.	Type-3 glutamine synthetase; Belongs to the glutamine synthetase family.	0.866
AYI70_g11565	AYI70_g5408	A0A1R1X1C5	A0A1R1XUM6	Asparagine synthetase domain-containing protein 1.	Putative asparagine synthetase [glutamine-hydrolyzing].	0.430
AYI70_g11565	AYI70_g625	A0A1R1X1C5	A0A1R1YFY4	Asparagine synthetase domain-containing protein 1.	GMP synthase [glutamine-hydrolyzing].	0.472
AYI70_g11565	AYI70_g7758	A0A1R1X1C5	A0A1R1XJ52	Asparagine synthetase domain-containing protein 1.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.769
AYI70_g11565	AYI70_g8663	A0A1R1X1C5	A0A1R1XEX9	Asparagine synthetase domain-containing protein 1.	Putative glutamine amidotransferase DUG3.	0.769
AYI70_g11696	AYI70_g11565	A0A1R1X0P3	A0A1R1X1C5	60 kDa lysophospholipase.	Asparagine synthetase domain-containing protein 1.	0.838
AYI70_g11696	AYI70_g1331	A0A1R1X0P3	A0A1R1YCZ9	60 kDa lysophospholipase.	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.	0.878
AYI70_g11696	AYI70_g3941	A0A1R1X0P3	A0A1R1XTT2	60 kDa lysophospholipase.	Amidophosphoribosyltransferase.	0.802
AYI70_g11696	AYI70_g4611	A0A1R1X0P3	A0A1R1XYD8	60 kDa lysophospholipase.	Glutamine-fructose-6-phosphate aminotransferase [isomerizing].	0.813
AYI70_g11696	AYI70_g5143	A0A1R1X0P3	A0A1R1XW73	60 kDa lysophospholipase.	Argininosuccinate synthase.	0.822
AYI70_g11696	AYI70_g530	A0A1R1X0P3	A0A1R1YGD6	60 kDa lysophospholipase.	Type-3 glutamine synthetase; Belongs to the glutamine synthetase family.	0.861
AYI70_g11696	AYI70_g5408	A0A1R1X0P3	A0A1R1XUM6	60 kDa lysophospholipase.	Putative asparagine synthetase [glutamine-hydrolyzing].	0.838
AYI70_g11696	AYI70_g625	A0A1R1X0P3	A0A1R1YFY4	60 kDa lysophospholipase.	GMP synthase [glutamine-hydrolyzing].	0.836
AYI70_g11696	AYI70_g7758	A0A1R1X0P3	A0A1R1XJ52	60 kDa lysophospholipase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.849
AYI70_g11696	AYI70_g8663	A0A1R1X0P3	A0A1R1XEX9	60 kDa lysophospholipase.	Putative glutamine amidotransferase DUG3.	0.813