STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g11430Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial. (401 aa)    
Predicted Functional Partners:
AYI70_g10153
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.870
AYI70_g12104
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.840
AYI70_g9488
Uroporphyrinogen decarboxylase.
  
 0.840
AYI70_g10094
HemK methyltransferase family member 2.
   
 
 0.636
AYI70_g7466
HemK methyltransferase family member 2.
   
 
 0.636
AYI70_g5851
Bifunctional methyltransferase.
   
 
 0.636
AYI70_g3904
Bifunctional methyltransferase.
   
 
 0.636
AYI70_g10195
Ceramide very long chain fatty acid hydroxylase SCS7.
   
  
 0.562
AYI70_g1299
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
  
 0.562
AYI70_g2198
Porphobilinogen deaminase.
  
  
 0.555
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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